Marleen de Bruijne
Professor
Image Analysis, Computational Modelling and Geometry
Universitetsparken 1
2100 København Ø
- 2013
- Published
Quantification of smoothing requirement for 3D optic flow calculation of volumetric images
Bab-Hadiashar, A., Tennakoon, R. B. & de Bruijne, Marleen, 2013, In: IEEE Transactions on Image Processing. 22, 6, p. 2128-2137 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Statistical coronary motion models for 2D + t/3D registration of X-ray coronary angiography and CTA
Baka, N., Metz, C. T., Schultz, C., Neefjes, L., van Geuns, R. J., Lelieveldt, B. P. F., Niessen, W. J., van Walsum, T. & de Bruijne, Marleen, 2013, In: Medical Image Analysis. 17, 6, p. 698-709 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Fifth International Workshop on Pulmonary Image Analysis: Nagoya, Japan, September 26, 2013
Beichel, R. R. (ed.), de Bruijne, Marleen (ed.), Kabus, S. (ed.), Kiraly, A. P. (ed.), Kuhnigk, J. (ed.), McClelland, J. R. (ed.), Kitasaka, T. (ed.), van Rikxoort, E. (ed.) & Rit, S. (ed.), 2013, CreateSpace Independent Publishing Platform . 160 p.Research output: Book/Report › Book › Research › peer-review
Chest-CT protocol standardization for multicentre trial in cystic fibrosis (CF) infants
Ciet, P., Graniel, K. G., Stick, S., de Bruijne, Marleen, Tiddens, H. & Straten, M. V., 2013, In: Insights into Imaging. 4, Supplement 1, 1 p., B-0737.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Respiratory muscle movement in Pompe disease using cine Magnetic Resonance Imaging
Ciet, P., Wens, S., Perez-Rovira, A., Logie, K., Wielopolski, P., de Bruijne, Marleen, Ploeg, A. V. D., Doorn, P. V. & Tiddens, H., 2013.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Iterated stacked classifiers for lung segmentation in computed tomography
Ciompi, F., Gatta, C. & de Bruijne, Marleen, 2013, The Fifth International Workshop on Pulmonary Image Analysis: Nagoya, Japan - September 26, 2013. Beichel, R. R., de Bruijne, M., Kabus, S., Kiraly, A. P., Kitasaka, T., Kuhnigk, J-M., McClelland, J. R., van Rikxoort, E. & Rit, S. (eds.). CreateSpace Independent Publishing Platform , p. 63-74 12 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Geometric tree kernels: classification of COPD from airway tree geometry
Feragen, A., Petersen, Jens, Grimm, D., Dirksen, A., Pedersen, J. J. H., Borgwardt, K. & de Bruijne, Marleen, 2013, Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28–July 3, 2013. Proceedings. Gee, J. C., Joshi, S., Pohl, K. M., Wells, W. M. & Zöllei, L. (eds.). Springer, p. 171-183 13 p. (Lecture notes in computer science, Vol. 7917).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Scalable kernels for graphs with continuous attributes
Feragen, A., Kasenburg, N., Petersen, Jens, de Bruijne, Marleen & Borgwardt, K., 2013, 27th Annual Conference on Neural Information Processing Systems 2013: NIPS 2013. Burges, C. J. C., Bottou, L., Welling, M., Ghahramani, Z. & Weinberger, K. Q. (eds.). Curran Associates, Inc., p. 216-224 9 p. (Advances in Neural Information Processing Systems, Vol. 26).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Toward a theory of statistical tree-shape analysis
Feragen, A., Lo, P. C. P., de Bruijne, Marleen, Nielsen, Mads & Lauze, Francois Bernard, 2013, In: I E E E Transactions on Pattern Analysis and Machine Intelligence. 35, 8, p. 2008-2021 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tree-space statistics and approximations for large-scale analysis of anatomical trees
Feragen, A., Owen, M., Petersen, Jens, Wille, M. M. W., Thomsen, L. H., Dirksen, A. & de Bruijne, Marleen, 2013, Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28–July 3, 2013. Proceedings. Gee, J. C., Joshi, S., Pohl, K. M., Wells, W. M. & Zöllei, L. (eds.). Springer, p. 74-85 12 p. (Lecture notes in computer science, Vol. 7917).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Chest computed tomography: a validated surrogate endpoint of cystic fibrosis lung disease?
Loeve, M., Krestin, G. P., Rosenfeld, M., de Bruijne, Marleen, Stick, S. M. & Tiddens, H. A., 2013, In: European Respiratory Journal. 42, 3, p. 844-857 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Carotid artery lumen segmentation in 3D free-hand ultrasound images using surface graph cuts
Lorza, A. M. A., Carvalho, D. D. B., Petersen, Jens, Dijk, A. C. V., Lugt, A. V. D., Niessen, W. J., Klein, S. & de Bruijne, Marleen, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (eds.). Springer, p. 542-549 8 p. (Lecture notes in computer science, Vol. 8150).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Airway distensibility in chronic obstructive pulmonary disease – evaluation by CT airway segmentation and lung density measurement based on the Danish lung cancer screening trial
M. W. Wille, M., Petersen, Jens, Dirksen, A., Pedersen, J. J. H. & de Bruijne, Marleen, 2013, In: American Journal of Respiratory and Critical Care Medicine. 187, p. A2871 1 p.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
An automatic system for segmentation, matching, anatomical labeling and measurement of airways from CT images
Petersen, Jens, Feragen, A., Owen, M., Lo, P., Wille, M. M. W., Thomsen, L. H., Dirksen, A. & de Bruijne, Marleen, 2013. 1 p.Research output: Contribution to conference › Poster › Research › peer-review
- Published
Manual airway labeling has limited reproducibility
Petersen, Jens, Feragen, A., Thomsen, L. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2013. 10 p.Research output: Contribution to conference › Poster › Research › peer-review
- Published
Quantitative airway analysis in longitudinal studies using groupwise registration and 4D optimal surfaces
Petersen, Jens, Modat, M., Cardoso, M. J., Dirksen, A., Ourselin, S. & de Bruijne, Marleen, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (eds.). Springer, Vol. 2. p. 287-294 8 p. (Lecture notes in computer science, Vol. 8150).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
The effect of inspiration on airway dimensions measured in CT images from the Danish Lung Cancer Screening Trial
Petersen, Jens, Wille, M., Thomsen, L., Feragen, A., Dirksen, A. & de Bruijne, Marleen, 2013, In: Insights into Imaging. 4, Supplement 1, p. 183 1 p., B-0163.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Efficient nonrigid registration using ranked order statistics
Tennakoon, R. B., Bab-Hadiashar, A., de Bruijne, Marleen & Cao, Z., 2013, 2013 IEEE 10th International Symposium on Biomedical Imaging (ISBI). IEEE, p. 496-499 4 p. (International Symposium on Biomedical Imaging. Proceedings).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
The history of bronchiectasis on CT in cystic fibrosis
Tepper, L. A., de Bruijne, Marleen, Caudri, D., Perez-Rovira, A. & Tiddens, H., 2013, In: Pediatric Pulmonology. 48, S36, p. 354 1 p., 408.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Automated measurement of diagnostic angles for hip dysplasia
de Raedt, S., Mechlenburg, I. B., Stilling, M., Mikkelsen, L. R., Søballe, K. & de Bruijne, Marleen, 2013, Medical Imaging 2013: Computer-Aided Diagnosis. Novak, C. L. & Aylward, S. (eds.). SPIE - International Society for Optical Engineering, 10 p. 867009. (Proceedings of S P I E - International Society for Optical Engineering, Vol. 8670).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Automated segmentation of atherosclerotic histology based on pattern classification
van Engelen, A., Niessen, W. J., Klein, S., Groen, H. C., van Gaalen, K., Verhagen, H. J., Wentzel, J. J., van der Lugt, A. & de Bruijne, Marleen, 2013, In: Journal of Pathology Informatics. 4, 7 p., 3.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A transfer-learning approach to image segmentation across scanners by maximizing distribution similarity
van Opbroek, A., Ikram, M. A., Vernooij, M. W. & de Bruijne, Marleen, 2013, Machine Learning in Medical Imaging: 4th International Workshop, MLMI 2013, held in conjunction with MICCAI 2013, Nagoya, Japan, September 22, 2013. Proceedings. Wu, G., Zhang, D., Shen, D., Yan, P., Suzuki, K. & Wang, F. (eds.). Springer, p. 49-56 8 p. (Lecture notes in computer science, Vol. 8184).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Automated brain-tissue segmentation by multi-feature SVM classification
van Opbroek, A., van der Lijn, F. & de Bruijne, Marleen, 2013, The MICCAI Grand Challenge on MR Brain Image Segmentation (MRBrainS13). 8 p. (The MIDAS Journal).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research
- 2012
- Published
3D+t/2D+t CTA-XA registration using population-based motion estimates
Baka, N., Metz, C. T., Schultz, C., Neefjes, L., van Geuns, R. J., Lelieveldt, B. P. F., Niessen, W. J., de Bruijne, Marleen & van Walsum, T., 2012, Proceedings, MICCAI-STENT'12: 1st MICCAI-Workshop on Computer Assisted Stenting . Demirci, L. & Radeva, U. (eds.). MICCAI , p. 64-71 8 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Statistical shape model-based femur kinematics from biplane fluoroscopy
Baka, N., de Bruijne, Marleen, Walsum, T. V., Kaptein, B. L., Giphart, J. E., Schaap, M., Niessen, W. J. & Lelieveldt, B. P. F., 2012, In: I E E E Transactions on Medical Imaging. 31, 8, p. 1573-1583 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fluoroscopic assessment of femoral kinematics using a statistical shape model
Baka, N., de Bruijne, Marleen, van Walsum, T., Kaptein, B., Giphart, E., Schaap, M., Niessen, W. & Lelieveldt, B., 2012, EORS 2012 Amsterdam: European Orthopaedic Research Society 20th annual meeting. EORS , p. 147148 2 p. 5B.2Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review
- Published
Towards exaggerated emphysema stereotypes
Chen, C., Sørensen, L., Lauze, Francois Bernard, Igel, Christian, Loog, M., Feragen, A., de Bruijne, Marleen & Nielsen, Mads, 2012, Medical Imaging 2012: Computer-Aided Diagnosis. van Ginneken, B. & Novak, C. L. (eds.). SPIE - International Society for Optical Engineering, 13 p. 83150Q. (Proceedings of S P I E - International Society for Optical Engineering, Vol. 7964). (Progress in Biomedical Optics and Imaging; No. 31, Vol. 13).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Standardization of a chest-CT protocol for multi-center trial in cystic fibrosis (CF) infants
Ciet, P., Graniel, K. G., Stick, S., de Bruijne, Marleen, Tiddens, H. & van Straten, M., 2012, In: Journal of Thoracic Imaging. 27, 5, p. W127 1 p., O47.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Shape-based assessment of vertebral fracture risk in postmenopausal women using discriminative shape alignment
Crimi, A., Loog, M., de Bruijne, Marleen, Nielsen, Mads & Lillholm, Martin, 2012, In: Academic Radiology. 19, 4, p. 446-454 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multi-feature-based plaque characterization in ex vivo MRI trained by registration to 3D histology
Engelen, A. V., Niessen, W. J., Klein, S., Groen, H. C., Verhagen, H. J. M., Wentzel, J. J., Lugt, A. V. D. & de Bruijne, Marleen, 2012, In: Physics in Medicine and Biology. 57, 1, p. 241-256 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Supervised in-vivo plaque characterization incorporating class label uncertainty
Engelen, A. V., Niessen, W. J., Klein, S., Groen, H. C., Verhagen, H. J. M., Wentzel, J. J., van der Lugt, A. & de Bruijne, Marleen, 2012, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI). IEEE, p. 246-249 4 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
A hierarchical scheme for geodesic anatomical labeling of airway trees
Feragen, A., Petersen, Jens, Owen, M., Lo, P. C. P., Thomsen, L., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2012, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2012: 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part III. Ayache, N., Delingette, H., Golland, P. & Mori, K. (eds.). Springer, p. 147-155 9 p. (Lecture notes in computer science, Vol. 7512).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Distribution, size, and shape of abdominal aortic calcified deposits and their relationship to mortality in postmenopausal women
Ganz, Melanie, de Bruijne, Marleen, Dam, E. B., Pettersen, P., Karsdal, M. A., Christiansen, C. & Nielsen, Mads, 2012, In: International Journal of Biomedical Imaging. 2012, 8 p., 459286.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A computer aided detection system for cerebral microbleeds in brain MRI
Ghafaryasl, B., van der Lijn, F., Poels, M., Vrooman, H., Ikram, M. A., Niessen, W. J., van der Lugt, A., Vernooij, M. & de Bruijne, Marleen, 2012, 2012 9th IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE, p. 138-141 4 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Mass preserving image registration for lung CT
Gorbunova, V., Sporring, Jon, Lo, P. C. P., Loeve, M., Tiddens, H. A., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2012, In: Medical Image Analysis. 16, 4, p. 786-795 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
A genome-wide association study identifies five loci influencing facial morphology in Europeans
Liu, F., van der Lijn, F., Schurmann, C., Zhu, G., Chakravarty, M. M., Hysi, P. G., Wollstein, A., Lao, O., de Bruijne, M., Ikram, M. A., van der Lugt, A., Rivadeneira, F., Uitterlinden, A. G., Hofman, A., Niessen, W. J., Homuth, G., de Zubicaray, G., McMahon, K. L., Thompson, P. M., Daboul, A. & 14 others, , 2012, In: P L o S Genetics. 8, 9, 13 p., e1002932.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extraction of airways from CT (EXACT’09)
Lo, P. C. P., Ginneken, B. V., Reinhardt, J. M., Yavarna, T., Jong, P. A. D., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijanska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O. & 10 others, , 2012, In: I E E E Transactions on Medical Imaging. 31, 11, p. 2093-2107 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
CT scores are predictive of survival in CF patients awaiting lung transplantation
Loeve, M., Hop, W. C. J., de Bruijne, Marleen, van Hal, P. T. W., Robinson, P., Aitken, M. L., Dodd, J. D. & Tiddens, H. A. W. M., 2012, In: Journal of Heart and Lung Transplantation. 31, 4, Supplement, p. s244 1 p., 713.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Chest computed tomography scores are predictive of survival in patients with cystic fibrosis awaiting lung transplantation
Loeve, M., Hop, W. C. J., de Bruijne, Marleen, van Hal, P. T. W., Robinson, P., Aitken, M. L., Dodd, J. D. & Tiddens, H. A. W. M., 2012, In: American Journal of Respiratory and Critical Care Medicine. 185, 10, p. 1096–1103 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Three-section expiratory CT: insufficient for trapped air assessment in patients with cystic fibrosis?
Loeve, M., de Bruijne, Marleen, Hartmann, I. C. J., Straten, M. V., Hop, W. C. J. & Tiddens, H. A. W. M., 2012, In: Radiology. 262, 3, p. 969-976 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regression-based cardiac motion prediction from single-phase CTA
Metz, C. T., Baka, N., Kirisli, H., Schaap, M., Klein, S., Neefjes, L. A., Mollet, N. R., Lelieveldt, B., de Bruijne, Marleen, Niessen, W. J. & Walsum, T. V., 2012, In: I E E E Transactions on Medical Imaging. 31, 6, p. 1311-1325 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Toward automatic regional analysis of pulmonary function using inspiration and expiration thoracic CT
Murphy, K., Pluim, J. P. W., Rikxoort, E. M. V., Jong, P. A. D., Hoop, B. D., Gietema, H. A., Mets, O., de Bruijne, Marleen, Lo, P. C. P., Prokop, M. & Ginneken, B. V., 2012, In: Medical Physics. 39, 3, p. 1650-1662 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
Quantitative imaging biomarkers in neurologic disease: population study perspective
Niessen, W. J., Vrooman, H. A., de Boer, R., van der Lijn, F., Achterberg, H. C., Koek, M., Klein, S., van der Lugt, A., de Bruijne, Marleen, Ikram, M. A. & Vernooij, M. W., 2012, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI). IEEE, p. 911 1 p.Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review
- Published
Performance of segmentation software on large longitudinal database of pulmonary nodules in the Danish Lung Cancer Screening Trial (DLCST)
Saghir, Z., Jacobs, C., van Ginneken, B., de Bruijne, Marleen, Dirksen, A. & Pedersen, J. H., 2012, In: European Respiratory Journal. 40, Supplement 56, p. 23s 1 p., P262.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Probability of malignancy based on automatic segmentation and software measurements of nodules in the Danish lung cancer screening trial (DLCST)
Saghir, Z., Jacobs, C., van Ginneken, B., de Bruijne, Marleen, Dirksen, A. & Pedersen, J. H., 2012, In: European Respiratory Journal. 40, Supplement 56, p. 777s 1 p., P4185.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Factors influencing the decline in lung density in a Danish lung cancer screening cohort
Shaker, S. B., Dirksen, A., Lo, P. C. P., Skovgaard, Lene Theil, de Bruijne, Marleen & Pedersen, J. H., 2012, In: European Respiratory Journal. 40, 5, p. 1142-1148 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The relationship between NT proBNP and CT lung density in long term smokers
Shaker, S. B., Ashraf, H., Rasmussen, T., Lo, P. C. P., de Bruijne, Marleen, Dirksen, A. & Pedersen, J. H., 2012, In: European Respiratory Journal. 40, Supplement 56, p. 103s 1 p., P652.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Texture-based analysis of COPD: a data-driven approach
Sørensen, L., Nielsen, Mads, Lo, P. C. P., Ashraf, H., Pedersen, J. J. H. & de Bruijne, Marleen, 2012, In: I E E E Transactions on Medical Imaging. 31, 1, p. 70-78 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Statistical tracking of tree-like tubular structures with efficient branching detection in 3D medical image data
Wang, X., Heimann, T., Lo, P., Sumkauskaite, M., Puderbach, M., de Bruijne, Marleen, Meinzer, H. P. & Wegner, I., 2012, In: Physics in Medicine and Biology. 57, 16, p. 5325-5342 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fully automated measurement of radiological angles in hip dysplasia using CT images
de Raedt, S., de Bruijne, Marleen, Mechlenburg, I., Stilling, M., Rømer, L. & Søballe, K., 2012. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
ID: 545222
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Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge
Research output: Contribution to journal › Journal article › Research › peer-review
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Atherosclerotic plaque component segmentation in combined carotid MRI and CTA data incorporating class label uncertainty
Research output: Contribution to journal › Journal article › Research › peer-review
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2150
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Distribution, size, shape, growth potential and extent of abdominal aortic calcified deposits predict mortality in postmenopausal women
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Published